List of bibliographic references indexed by Computational Biology (methods)
Number of relevant bibliographic references: 43.
[20-40] [
0 - 20][
0 - 43][
40-42][
40-60]
| Ident. | Authors (with country if any) | Title |
|---|
| 002384 (2014) |
Erik K. Malm [Suède] ; Vaibhav Srivastava [Suède] ; Gustav Sundqvist [Suède] ; Vincent Bulone [Suède] | APP: an Automated Proteomics Pipeline for the analysis of mass spectrometry data based on multiple open access tools. |
| 002527 (2013) |
Eli Rodgers-Melnick [États-Unis] ; Mark Culp ; Stephen P. Difazio | Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS. |
| 002543 (2013) |
Bhanu Rekapalli [États-Unis] ; Paul Giblock ; Christopher Reardon | PoPLAR: Portal for Petascale Lifescience Applications and Research. |
| 002550 (2013) |
Zhanchao Wang [République populaire de Chine] ; Haizhen Zhang ; Jingli Yang ; Yunlin Chen ; Xuemei Xu ; Xuliang Mao ; Chenghao Li | Phylogenetic, expression, and bioinformatic analysis of the ABC1 gene family in Populus trichocarpa. |
| 002986 (2012) |
Hai-Ling Yang [République populaire de Chine] ; Yan-Jing Liu ; Cai-Ling Wang ; Qing-Yin Zeng | Molecular evolution of trehalose-6-phosphate synthase (TPS) gene family in Populus, Arabidopsis and rice. |
| 002A70 (2012) |
Chunfang Zheng [Canada] ; David Sankoff | Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes. |
| 002C56 (2011) |
Peter E. Larsen [États-Unis] ; Avinash Sreedasyam ; Geetika Trivedi ; Gopi K. Podila ; Leland J. Cseke ; Frank R. Collart | Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome. |
| 002D54 (2011) |
Ping Xuan [République populaire de Chine] ; Maozu Guo ; Xiaoyan Liu ; Yangchao Huang ; Wenbin Li ; Yufei Huang | PlantMiRNAPred: efficient classification of real and pseudo plant pre-miRNAs. |
| 003106 (2010) |
Qin Xu [États-Unis] ; Xia Ye ; Li-Yan Li ; Zong-Ming Cheng ; Hong Guo | Structural basis for the action of xyloglucan endotransglycosylases/hydrolases: insights from homology modeling. |
| 003177 (2010) |
Zhenhai Zhang [République populaire de Chine] ; Jingyin Yu ; Daofeng Li ; Zuyong Zhang ; Fengxia Liu ; Xin Zhou ; Tao Wang ; Yi Ling ; Zhen Su | PMRD: plant microRNA database. |
| 003186 (2010) |
P R K. Ingvarsson [Suède] | Natural selection on synonymous and nonsynonymous mutations shapes patterns of polymorphism in Populus tremula. |
| 003337 (2010) |
Yoshiyuki Ogata [Japon] ; Hideyuki Suzuki ; Nozomu Sakurai ; Daisuke Shibata | CoP: a database for characterizing co-expressed gene modules with biological information in plants. |
| 003467 (2009) |
Andreas Sjödin [Suède] ; Nathaniel Robert Street ; Göran Sandberg ; Petter Gustafsson ; Stefan Jansson | The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome. |
| 003584 (2009) |
Max Bylesjö [Suède] ; Robert Nilsson ; Vaibhav Srivastava ; Andreas Grönlund ; Annika I. Johansson ; Steffan Jansson ; Jan Karlsson ; Thomas Moritz ; Gunnar Wingsle ; Johan Trygg | Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen. |
| 003676 (2009) |
Dandan Song [République populaire de Chine] ; Yang Yang ; Bin Yu ; Binglian Zheng ; Zhidong Deng ; Bao-Liang Lu ; Xuemei Chen ; Tao Jiang | Computational prediction of novel non-coding RNAs in Arabidopsis thaliana. |
| 003756 (2008) |
Timothy E. Gookin [États-Unis] ; Junhyong Kim ; Sarah M. Assmann | Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling. |
| 003922 (2008) |
Eric Lyons [États-Unis] ; Brent Pedersen ; Josh Kane ; Maqsudul Alam ; Ray Ming ; Haibao Tang ; Xiyin Wang ; John Bowers ; Andrew Paterson ; Damon Lisch ; Michael Freeling | Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. |
| 003995 (2008) |
Huaizhen Qin [États-Unis] ; Tao Feng ; Scott A. Harding ; Chung-Jui Tsai ; Shuanglin Zhang | An efficient method to identify differentially expressed genes in microarray experiments. |
| 003C13 (2007) |
Helge Küster [Allemagne] ; Anke Becker ; Christian Firnhaber ; Natalija Hohnjec ; Katja Manthey ; Andreas M. Perlick ; Thomas Bekel ; Michael Dondrup ; Kolja Henckel ; Alexander Goesmann ; Folker Meyer ; Daniel Wipf ; Natalia Requena ; Ulrich Hildebrandt ; Rüdiger Hampp ; Uwe Nehls ; Franziska Krajinski ; Philipp Franken ; Alfred Pühler | Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses. |
| 003C15 (2007) |
Max Bylesjö [Suède] ; Daniel Eriksson ; Miyako Kusano ; Thomas Moritz ; Johan Trygg | Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data. |
| 003E11 (2006) |
Kris Morreel [Belgique] ; Geert Goeminne ; Véronique Storme ; Lieven Sterck ; John Ralph ; Wouter Coppieters ; Peter Breyne ; Marijke Steenackers ; Michel Georges ; Eric Messens ; Wout Boerjan | Genetical metabolomics of flavonoid biosynthesis in Populus: a case study. |
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